tag:blogger.com,1999:blog-8556606402273577452.post8051523156483002791..comments2024-03-22T04:49:52.774-07:00Comments on Charles Warden's Science Blog: Bioinformatics 101: Pathway AnalysiscdwSciencehttp://www.blogger.com/profile/11895261662921346808noreply@blogger.comBlogger5125tag:blogger.com,1999:blog-8556606402273577452.post-63121183800347739572013-08-29T01:43:35.585-07:002013-08-29T01:43:35.585-07:00Thank you for the congrats and the insertion!
A li...Thank you for the congrats and the insertion!<br />A little thing, the correct link for FIDEA is http://www.biocomputing.it/fidea (and not cassandra.med.uniroma1.it/fidea).<br />Thanks again.Anonymoushttps://www.blogger.com/profile/12936207764066659799noreply@blogger.comtag:blogger.com,1999:blog-8556606402273577452.post-73229968734481215012013-06-14T10:59:14.153-07:002013-06-14T10:59:14.153-07:00Thanks for the suggestion - and congrats on your p...Thanks for the suggestion - and congrats on your publication in NAR!cdwSciencehttps://www.blogger.com/profile/11895261662921346808noreply@blogger.comtag:blogger.com,1999:blog-8556606402273577452.post-49409449572586725542013-06-14T03:24:22.000-07:002013-06-14T03:24:22.000-07:00Very informative summary!
For NGS analysis you co...Very informative summary!<br /><br />For NGS analysis you could mention FIDEA (http://www.biocomputing.it/fidea)<br />The FIDEA server allows the user to directly input the results of a differential expression analysis and it performs<br />the enrichment analysis considering the upregulated and downregulated genes both together and separately. Anonymoushttps://www.blogger.com/profile/12936207764066659799noreply@blogger.comtag:blogger.com,1999:blog-8556606402273577452.post-58357014340903872412013-06-07T10:57:58.522-07:002013-06-07T10:57:58.522-07:00Good suggestion! I will add a link in this sectio...Good suggestion! I will add a link in this section for Reactome!cdwSciencehttps://www.blogger.com/profile/11895261662921346808noreply@blogger.comtag:blogger.com,1999:blog-8556606402273577452.post-10761168070004528952013-06-07T07:17:21.448-07:002013-06-07T07:17:21.448-07:00Very nice resource, thank you very much. I'll ...Very nice resource, thank you very much. I'll recommend it to my colleagues. <br /><br />For Gene Expression analysis, there is also a tool in the Reactome database: http://www.reactome.org/ReactomeGWT/entrypoint.html#ExpressionDataUploadPagedalloliogmhttps://www.blogger.com/profile/11230528124875348719noreply@blogger.com